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The volume of urine collected affected the test performances of the ligase chain reaction and the transcription mediated amplification assays for detection of C. trachomatis.

Volume effect on sensitivity of nucleic acid amplification tests for detection of Chlamydia trachomatis in urine specimens from females.
Moncada J, Chow JM, Schachter J.
Journal of Clinical Microbiology 2003;41:48424843.

 

Summary:

Question
Does the volume of urine collected affect the sensitivity of nucleic acid amplification tests for the detection of C. trachomatis in first-catch urine specimens from women?

Design
This report describes a blinded, head-to-head comparison of three nucleic acid amplification tests (NAATs), including ligase chain reaction (LCR), polymerase chain reaction (PCR), and transcription mediated amplification (TMA), to examine the effect of first-catch urine volume on assay performance.

Participants
Six hundred fifty-five women seen at an STD clinic in San Francisco, CA, with or without symptoms, who had not urinated within 2 h prior to specimen collection, were tested.

Description of Tests and Diagnostic Standard
Women were given a urine collection cup marked with a black line at the 30 ml level and instructed to collect 30 ml or less of first catch urine. The specimens were held at 4oC until testing or freezing (TMA only). Specimens were tested for C. trachomatis within 4 days by LCR (Abbott Laboratories, Abbott Park, IL) and within 7 days by PCR (Roche Molecular Systems, Branchburg, NJ). Specimens were held at -70oC for 6 months, then tested for C. trachomatis by TMA (Gen-Probe Inc., San Diego, CA). Specimens were tested according to the manufacturers' instructions for each NAAT, but not tested for inhibitors. Specimens were considered positive for C. trachomatis if at least 2 of the 3 NAAT results were positive.

Main Outcome Measures
For each NAAT, the prevalence of C. trachomatis and the sensitivity of detection, stratified by urine volume, were determined.

Main Results
The mean urine volume was 44.4 + 18.1 ml (range = 10 to 90 ml). Two hundred one (31%) of the 655 women provided 30 ml or less of urine. The overall sensitivities of LCR, PCR, and TMA were 92.7%, 100%, and 87.8%, respectively. The performances of the NAATs stratified by urine volume are shown in the table. For the TMA, C. trachomatis prevalence decreased significantly as urine volume increased.

Authors' Conclusions
For LCR and TMA, the volume criteria stated in the product inserts, 15 to 20 ml for LCR and 30 to 50 ml for TMA, might not be optimal for these tests. For TMA, the rejection of specimens on the basis of excess volume may be prudent.

Source of funding: Centers for Disease Control and Prevention, Atlanta, GA

For correspondence: Jeanne Moncada, Chlamydia Laboratory at SFGH, Department of Laboratory Medicine, Bldg. 30, Room 416, University of California, San Francisco, CA 94110. E-mail address: jevemo@itsa.ucsf.edu.

   

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